Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943454.1_cds_XP_016486625.1_77449
CDS Infomation

[gene=LOC107806866] [db_xref=GeneID:107806866] [protein=synaptotagmin-4-like] [protein_id=XP_016486625.1] [location=join(38518..38622,39633..39734,40361..40411,41950..42070,43031..43152,43261..43359,43575..43655,43743..43828,44471..44696,44818..44982,45338..45736)] [gbkey=CDS]
Sequence

ATGGGGTTGATTTCTGGGATACTGATGGGGATGATCTTGGGGATCGGTTTAATGGCAGCT
TGGAAACATATGATGAGGTACAGGAGTAACAAACGAATTGCTAAGGCAGTAGATGTAAAA
CTAATGGGCTGCCTCAACAGGGATGATCTAAAGAAAGTGTGTGGTGATAACTTTCCTGAA
TGGATATCATTCCCGGTTTATGAGCAGGTCAAGTGGTTGAACAAACAATTGAGCAAATTG
TGGCCATTTATTGCCGAAGCAGGAGAGGCAATTATAAGAGAATCTGTTGAACCTCTTTTA
GAAGATTATCGACCCCCTGGAATTACTTCGTTGAAGTTCAGCAAATTATCATTGGGAACT
GTGGCACCTAAAATAGAAGGTATTCGTGTTCAGAGCCTTAAAAAAGGTCAAATCACTATG
GATATTGACCTCCGATGGGGTGGTGATCCCAATATTGTTTTAGGTGTTGAAGCTGCAATG
GTTGCTTCCATACCCATTCAGTTGAAAAATCTTCAAGTATTCACTGTTATTCGTGTTATC
TTCCAACTAACTGAGGAAATTCCTTGCATCTCGGCTGTTGTTGTAGCATTACTTTCTGAG
CCAAAGCCTAGAATCGACTATGTTTTGAAGGCAGTCGGTGGAAGTTTAACTGCTCTTCCT
GGACTTTCGGATATGATTGATGACACTGTAAATACAATAGTGACAGATATGCTAGAATGG
CCCCACAGAATTGTTGTTCCAATTGGCGGCATACCTGTGGATACTAGTGATTTGGAGCTT
AAGCCACAGGGGAAGCTCATAGTAACTGTAGTCAAGGCTAATGGCTTAAAGAACCACGAA
ATGATAGGAAAATCTGATCCATATGTGGTTGTATACATTCGTCCACTTTTCAAGGTTAAG
ACAAAAACCATTGACAACAACCTAAATCCCATTTGGGATCAGACATTTGAGTTAATTGCA
GAAGACAAGGAGACCCAATCCCTCATTGTGGAGGTCTTCGATAAAGACGTTGGGCAAGAC
CAGCGAATGGGTGTCGCTAAGTTGCCTCTGAATGAGCTAGTAGCTGAGACTGCCAAAGAA
ATTGAATTAAGGTTGCTGCCAAAACTTGATATGCTCAAAGTCAAAGATAAGAAGGATAGG
GGAACTATCACAATAAAGGTGTTGTATCATGAATTCAACAAGGAAGAGCAGTTAGCTGCT
CTGGAGGCAGAGAAGGCGATCCTAGAAGAAAGGAAGAAGCTGAAAGCAGAAGGTGTCATT
GGGAGCACAATGGATGCCCTTGATGGGGCTGCATCACTGGTTGGTTCAGGTGTTGGTTTG
GTGGGCACTGGTCTTGGGGCAGGCGTGGGGCTCATTGGAACCGGGGTAGGTGCTGGTGTA
GGAATAGTTGGAAGTGGCTTTGGAGCTGTTGGTAGTGGCCTAAGCAAAGCTGGAAAATTT
ATGGGAAGGACATTCACAGGCAGTTCAAAGAAGAGTGGTTCCTCTACTCCAGTAAACTCT
GTTCAAGAAAATGGTGGTGCAAAGCCACTCAAGACTGTACTTGCAAATACTGATTAG

Peptide Sequence

PEP ID

XP_016486625.1
PEP Infomation

PREDICTED: synaptotagmin-4-like [Nicotiana tabacum]
Sequence

MGLISGILMGMILGIGLMAAWKHMMRYRSNKRIAKAVDVKLMGCLNRDDLKKVCGDNFPE
WISFPVYEQVKWLNKQLSKLWPFIAEAGEAIIRESVEPLLEDYRPPGITSLKFSKLSLGT
VAPKIEGIRVQSLKKGQITMDIDLRWGGDPNIVLGVEAAMVASIPIQLKNLQVFTVIRVI
FQLTEEIPCISAVVVALLSEPKPRIDYVLKAVGGSLTALPGLSDMIDDTVNTIVTDMLEW
PHRIVVPIGGIPVDTSDLELKPQGKLIVTVVKANGLKNHEMIGKSDPYVVVYIRPLFKVK
TKTIDNNLNPIWDQTFELIAEDKETQSLIVEVFDKDVGQDQRMGVAKLPLNELVAETAKE
IELRLLPKLDMLKVKDKKDRGTITIKVLYHEFNKEEQLAALEAEKAILEERKKLKAEGVI
GSTMDALDGAASLVGSGVGLVGTGLGAGVGLIGTGVGAGVGIVGSGFGAVGSGLSKAGKF
MGRTFTGSSKKSGSSTPVNSVQENGGAKPLKTVLANTD

Transcript Sequence

Gene sequence data has not been registered.